Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
1IC2 Chain:A ((1-79)) | ------------------------------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24141 for 309 contacts (78.1/contact) +
2D Compatibility (PS) -10028 + (NN) -15548 + (LL) 9520
1D Compatibility (HY) -400 + (ID) 650
Total energy: 7035.0 ( 22.77 by residue)
QMean score : 1.243
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