Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------VSLYMLVSTFA----VAFI------ITVIGVPLFIPFLVKLKFGQ-----SIRDEGPKMHEKKSGTPTMGAVVFITAM------LISFLVFSFISGEVS-------AATWLLFIA---LALFGALGFLDDYIKVVQ---KRNLGLTSK--QKFLGQVVISILFYLV----------YHFNDFAETLNIPFTNIEVDLGWFFVIFI-LFWLVGFSNAVNLTDGLDGLVSGLSVI--AFSAFGVIAFYQEQMDVAI-------FCFAIVGGMLGFLLFNKNPAKIFMGDTGSLALGGSIAAISILV----------HQEWLLLLIGIIFVIETASV----------------ILQVFYFKAT------GGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLVGAIISVCVVIF-------- |
| 4US3 Chain:A ((10-450)) | GREQWASRLGFILAAMGSAVGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGKPWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPDIFDSIRLGPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGVLGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGWK-TSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -378329 for 2566 contacts (-147.4/contact) +
2D Compatibility (PS) -31865 + (NN) -2090 + (LL) 132
1D Compatibility (HY) -22400 + (ID) 3200
Total energy: -437752.0 ( -170.60 by residue)
QMean score : 0.152
|
|
|