Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3RBA Chain:A ((4-156))
-----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL-
General information:
TITO was launched using:
RESULT:
Template:
3RBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105916 for 1180 contacts (-89.8/contact) +
2D Compatibility (PS) -16662 + (NN) -8067 + (LL) 212
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -151533.0 ( -128.42 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3RBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RBA-query.scw
PDB file :
Tito_Scwrl_3RBA.pdb
: