Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLKVWSVLTIICMT--------VVVFGGALVTKTGSADGCGNSWPLCNGQLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAIC---AWIYMKNRRETKPLAIIAVLFLIIQALMGMAAVVWGQNPYIMAL-HFGISIICYASIVLLALMIFEVDRKFD-ARN-LVMGTKLRV----NIYALTIYTYLAVYTGALVRHEKASMA-VPVWPFENGHFI-------MPTSV-QDYVQYFHRLAAFIL---IVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAHSL-IITMLFALLCYLCLLASRSKSNRLRIK |
| 3G3L Chain:A ((10-305)) | -PAEAKYYIAGTITDATTGQELTTAKVTLGD--KSVTSSFNEQVNYKAEGYALVVSADGYYPVKRQVYLNQVSDGQTSVATVNVALVSVEAAVIPPVVPPTDPETDIN--EGEATKVADKAVEVAKPSESTVTDMLAGTT----AT----PEEKKALDETLEMAGGMKVGETTPEVLADGSILAITPVKFTNPIQDAP--------AMVPYFYNEGCELTGDVKEVAAPVAVAADIQKAFLSNAAKALNMNAGFVQKIGYTRISVLNGYSILGYTIKGQLVSKKLTFLISG-KYYEGI---VSYQKSVMIYPNYYS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289295 for 1973 contacts (-146.6/contact) +
2D Compatibility (PS) -29028 + (NN) -5276 + (LL) 5264
1D Compatibility (HY) 1200 + (ID) 2600
Total energy: -319735.0 ( -162.06 by residue)
QMean score : 0.191
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