Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQIAGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLGRYFGNEKE--GVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVEAGFLAENSKSFVLLDKYGKIEPEVTTI |
| 4RFA Chain:A ((153-221)) | ------------------------------------------------------------------------------------------------------------------------------------------------------RIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLI-NKKSPYRIDK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41137 for 451 contacts (-91.2/contact) +
2D Compatibility (PS) -7045 + (NN) -337 + (LL) 12140
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -43029.0 ( -95.41 by residue)
QMean score : 0.774
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