Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------M-FQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFNTVFMATIIS-AVIGTLWMAIFANYPIAIAPGLGMNAYFVT-VVTTQKLDYSVAFAAVFVAGIIFLLLSLTPLREKI-IEAIPHNLKAGITAGIGLFIAFL-GFRM-TGIIVSNDSNLVGLGDLHSKEAILAIVGLLITLIL-LALNVK-GALFIGMIATGIIAFITGELKF-TDGIVKLPPMPEFVFTN-PIHAFGDVMSYGLYAVVLSFLLITIFDTTGT-MIGVAKK-AGLMKGESLPNAKQALMADAVATSVGSMFGTT--PTSAYIESSAGVA-TGGRTGLTTLTVAILFMVSA---FFAPLVGAVSGIS--AITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAFGFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH |
| 4KQ7 Chain:A ((2-374)) | QSNMTNEMFDLAKLKSGVKNKRIS--STDPTGGNRDHLEPF------KPGEKRIIADIKGMGVINHIWVTIAPP-----PPTLSRNDIIIRMYWDGNDYPSVESPIGPFFG---------QGWDERYNYASLP--LSAGPENGTGLSCYFAMPFEKGARIEIENQSDRN-----------IDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGKGHFVGINYYVHCPT-----------PMWYGEGDDMW-FIDGEKVPSL--------IGTGTEDFFNTAWCPKEAFSHPYFGYPRVNNDIGWLGRTHVYRFFIEDPIFFEKSLKGTIEHGSNNNLTLDLSTVAYWYQDSAV-------------------ALPEAPTKAQRAPKPFINHVDIHRWRDAWRKSKGNKATL---------WGNE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -331773 for 2622 contacts (-126.5/contact) +
2D Compatibility (PS) -36496 + (NN) 2705 + (LL) 7372
1D Compatibility (HY) -2000 + (ID) 3550
Total energy: -363742.0 ( -138.73 by residue)
QMean score : 0.144
|
|
|