Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKQFYTYDENGDYLETILVFEDEKGLINQPKNSTNIEPSIIENGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFESNLG |
2J40 Chain:A ((37-63)) | ---------------------------------------------------HYPLYIGGEWVDTKERMVSLNPSAPSE--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3000 for 87 contacts (34.5/contact) +
2D Compatibility (PS) -2635 + (NN) 384 + (LL) 5828
1D Compatibility (HY) 0 + (ID) 550
Total energy: 6027.0 ( 69.28 by residue)
QMean score : 0.418
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