Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQTPKNAHCYSFLDYESSVYFRGQEFVVKQLSHDAVGKTLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRGFSWEIIDPSNILEKVQQENFGNNNYLTLIDQLLDDYGVVVIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQDYPATTGSVILKNDYECEKGDYVLFIYEPLGIDYDVQIVAYKKYPFTIKAPEITLSNNKKSIVSIMAQLAKVLKGAK |
| 3CPF Chain:A ((9-51)) | ---------------------------------------------------CSALRKNGFVVLKGRPCKIVEMSTSKT--HAKVHLVGIDIF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11814 for 201 contacts (-58.8/contact) +
2D Compatibility (PS) -3965 + (NN) 1942 + (LL) 18408
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 1871.0 ( 9.31 by residue)
QMean score : 0.104
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