Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILSLLEKDQELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK
3GHG Chain:A ((131-154))
--------------------------------------------------------------------QHIQLLQKNVRAQLVDMKRLEVDI-
General information:
TITO was launched using:
RESULT:
Template:
3GHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184 for 91 contacts (-2.0/contact) +
2D Compatibility (PS) -2586 + (NN) -1074 + (LL) 5992
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 798.0 ( 8.77 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3GHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GHG-query.scw
PDB file :
Tito_Scwrl_3GHG.pdb
: