Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFV---------THSKNGYYDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDEFSTEAFNLR----GALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
1QNG Chain:A ((15-148))
--------------------SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDE----NFNMKHDQPGLLSMANAGPNTNSSQFFITLVP---------------------------CPWLDGKHVVFGKVIEGMNVVREM-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1QNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38214 for 841 contacts (-45.4/contact) +
2D Compatibility (PS) -12713 + (NN) -6172 + (LL) 5096
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -68153.0 ( -81.04 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1QNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QNG-query.scw
PDB file :
Tito_Scwrl_1QNG.pdb
: