Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK
2O01 Chain:I ((1-30))
-----------------------MINLPSLFVPLVGLLFPAVAMASLFLHVEK---------
General information:
TITO was launched using:
RESULT:
Template:
2O01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9508 for 122 contacts (77.9/contact) +
2D Compatibility (PS) -2908 + (NN) 382 + (LL) 4412
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 9444.0 ( 77.41 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2O01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O01-query.scw
PDB file :
Tito_Scwrl_2O01.pdb
: