Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKKVVTD-LDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTIEYILEQNGKAI-LFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEKAIDELKDGEVLLFENTRF--------EDIDGKKESKNDPELGKYWASL---GDVFVNDAFGTAHRAHASNVGIASNL-ESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKADKVLVGGGMTFTFMAA-QGQEIGKSLLEADKVELAKGLLEKA---GDKLVLPVDAVVSKEFSNDAPF-HTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTIGVCEAIANLTD--ATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVASISDK
1VJD Chain:A ((2-415))LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAIPSIKFCLDNGAKSVVLMSHLGRPDGIPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHVEEEGKGKDASGSKVKADPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGV--NLPKKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGSKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN-


General information:
TITO was launched using:
RESULT:

Template: 1VJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -206178 for 3397 contacts (-60.7/contact) +
2D Compatibility (PS) -42335 + (NN) -11503 + (LL) 180
1D Compatibility (HY) -37200 + (ID) 9450
Total energy: -306486.0 ( -90.22 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_1VJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VJD-query.scw
PDB file : Tito_Scwrl_1VJD.pdb: