Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTATLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIIAT-GFIDDIFDL------SPKWKMLGQILAALCVTVW-----GDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGISIIALMTIAGMALLLKDVFVAPV---------------ALILVAAVAAFLIYNFPPASIFMGDTGALFLGYMIAVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERMPISSADRSHIHHRLMALGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGEDYRPILNLLQKIHRKRK |
| 4J72 Chain:A ((20-363)) | ----FAFNVLKYITFRSFTAVLIAFFLTLVLSPSFINRLKKYTPTMGGIVILIVVTLSTLLLMRWDIKYTWVVLLSFLSFGTIGFWDDYVKLKNKKGISIKTKFLLQVLSASLISVLIYYWADIDTILYFPFFKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLDGLAIGPAMTTATALGVVAYAVGHSKIAQYLNIPYVPYAGELTVFCFALVGAGLGFLWFNSFPAQMFMGDVGSLSIGASLATVALL--TKSEFIFAVAAGVFVFETISVILQIIYFRWTGGKRLFK--RAPFHHHLELNGLPEPKIVVRMWIISILLAIIAIS----------------------------------------------MLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310938 for 2472 contacts (-125.8/contact) +
2D Compatibility (PS) -30850 + (NN) -12050 + (LL) 5400
1D Compatibility (HY) -24400 + (ID) 3950
Total energy: -376788.0 ( -152.42 by residue)
QMean score : 0.287
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