Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLK-ELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
2ZHG Chain:A ((16-116))
----EVAKRSGVAVSALHFYESKGLITSI-RNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGE--AFGV-----TLSAKEWKQLSSQWREELDRRIHTLVALRDEL---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47149 for 573 contacts (-82.3/contact) +
2D Compatibility (PS) -10242 + (NN) -6321 + (LL) 3588
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -67874.0 ( -118.45 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHG-query.scw
PDB file :
Tito_Scwrl_2ZHG.pdb
: