Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDEDIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
1VF5 Chain:E ((1-32)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MILGAVFYIVFIALFFGIAVGIIFAIKSIKLI-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12297 for 134 contacts (-91.8/contact) +
2D Compatibility (PS) -2865 + (NN) 3477 + (LL) 24916
1D Compatibility (HY) -6800 + (ID) 350
Total energy: 6081.0 ( 45.38 by residue)
QMean score : -0.440
|
|
|