Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDEDIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT
1VF5 Chain:E ((1-32))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MILGAVFYIVFIALFFGIAVGIIFAIKSIKLI--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12297 for 134 contacts (-91.8/contact) +
2D Compatibility (PS) -2865 + (NN) 3477 + (LL) 24916
1D Compatibility (HY) -6800 + (ID) 350
Total energy: 6081.0 ( 45.38 by residue)
QMean score : -0.440

(partial model without unconserved sides chains):
PDB file : Tito_1VF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VF5-query.scw
PDB file : Tito_Scwrl_1VF5.pdb: