Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPE----------RFNEINKE--IKRQLGMFTAL-NGNVRASLVGLLMANNNASRE--------------SVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTE--LAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQS---GQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS-- |
1Q9J Chain:A ((1-418)) | MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHR--LSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLAN-GVIQQSGLH-FGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3510 for 2383 contacts (1.5/contact) +
2D Compatibility (PS) -33355 + (NN) 1529 + (LL) 388
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -38728.0 ( -16.25 by residue)
QMean score : 0.247
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