Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP----EYMLSHTCLVREPEKFYQFVTENMY-YPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLK----SDIHT--DCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI
2H59 Chain:A ((3-199))
MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSH------PEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELAGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAEL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95545 for 1371 contacts (-69.7/contact) +
2D Compatibility (PS) -20770 + (NN) -11108 + (LL) 3952
1D Compatibility (HY) -18800 + (ID) 3600
Total energy: -145871.0 ( -106.40 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2H59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H59-query.scw
PDB file :
Tito_Scwrl_2H59.pdb
: