Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
3T5X Chain:A ((367-379))
-----------------------------LIYMGHVKGYISH-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3T5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2781 for 40 contacts (-69.5/contact) +
2D Compatibility (PS) -1342 + (NN) -336 + (LL) 6312
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 403.0 ( 10.08 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_3T5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T5X-query.scw
PDB file :
Tito_Scwrl_3T5X.pdb
: