Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLSIIILVTLIIGNVMFFNFISNTLSRDFLFKEQTVVQFKYKEDYQVSDFNNSIKTFSETKNINIAQYTFLGERDLNIYGSNCQFAPNINLKKGDYPNKNQFLANEESVDKKQSGVIY--HPSKYWSLKVYDFGQIKNVGLSDTFYVSGLDNQNTYQAFLKE-FEQYGEVTTKSVDVSWWKYINIPLLMTLLLCFAILFVFTYYYLRYSKQRLLVNRIWGNSELVTLMSLFNKTIIFTLFSVLAILITFVSIVLANGLATYLVEIVWKLLLFNVLLFIFILFPMYFFGLLRIKKIDQAKSDQRMQSSRQHLAINLVIKFVLLCLFIGTFIASYQSLQTLNTRLANIDVWEATKDIFKVKVGVLPEGIQDDLKADKELNDNLSAFYEEGTSKKEMFLMYSNNFQRSETNTFFYETYLKKGSEINSPEGNSVEIDFNYLKLNPIKSIKGQNVGKEAIISDKVLNIIVPNSKKGLEKDIKNTFLDYFYFQKVEVANIYNEALDLPAVALSKEDLRVNIIYAENNQDYFSYDSNTGDFRTGNITDPIAIVYTGNIDSSSIGAHVTSSVYFVDKSNGDAFNAILPLISNSNAREITHVRSVYQEVSSEITTLKWQIYQQLIGTIILALCLCSFMVLLVLSYYRENLYKQLIYHVFGYSFWKSSKWFIISNLFVSVFSGILIFILSKEPVALYFSVVILIIELCAIYFIKEKAIYKDFKAILKGEKYD------ |
1UWK Chain:A ((4-557)) | NNKYRDVEIRAPR-----------GNKLTAKSWLTEAPLRMLMNNLDPQVAEN----------------------PKELVVYGGIGRAA-------RNWECYDKIVETLTRLEDDETLLVQSGKPVGVFK----THSNAPRVLIANSNLVPHWANWEHFNELDAKGLAMYGQMT-----AGSWIYIGS----------QGIVQGTYETFVEAGRQHYGGSLKGK------------------------------WVLTAGLGGMGGAQPLAATLAGACSLNIESQQSRIDFRLETRYVDEQATD--LDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTSAHDPLN---GYLPAG-WTWEQYRDRAQTEPAAVVKAAKQSMAVHVQAMLDFQKQGVPTFDYGNNIRQMAKEEGVA-----------DAFDFPGFVPAYIRPLFCRGVGPFRWAALS---GEAEDIYKT--DAKVKELIPDDAHLHRWLDMARERISFQGLPARICWVGLGLRAKLGLAFNEMVRSGELSAPVVIGRD-HLDSGSVSSPNAETEAMRDGSDAVSDWPLLNALLNTAG-----------------------------GATWVSLHHGG-----------------------GVGMGFS------------QHSGMVIVCDGTDEAAERIARVLTNDPGTGVMRHAD-AGYDIAIDCAKEQGLDLPMITG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289493 for 5353 contacts (-54.1/contact) +
2D Compatibility (PS) -57170 + (NN) -9231 + (LL) 16772
1D Compatibility (HY) 1200 + (ID) 4100
Total energy: -342022.0 ( -63.89 by residue)
QMean score : 0.182
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