Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceVFNIQTFNAIAKEGLKTFDLEKYVIDANQPADGILLRSYNLHDFDFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPILEGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMDVVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLVKDNAVLLNFSRGELVDSASVKEALDDGLLR-----LYITDFATKE------LLNHKKVHVFPHLGASTEEAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKQDLLAVQGVLRVRVIEPLGVTV
1YBA Chain:A ((85-409))----------------------------------------------------------GTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANA-----KAHRGVWNKLAAGS-----FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYD----IENKLPLGNATQ-VQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDV-AEKALQAMKAIPGTIRARLL-------


General information:
TITO was launched using:
RESULT:

Template: 1YBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -156779 for 2381 contacts (-65.8/contact) +
2D Compatibility (PS) -34616 + (NN) -12352 + (LL) 5728
1D Compatibility (HY) -21600 + (ID) 5100
Total energy: -224719.0 ( -94.38 by residue)
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_1YBA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YBA-query.scw
PDB file : Tito_Scwrl_1YBA.pdb: