Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIFAKEDDLE-EIISSHPKILLNFWAEWCAPCRCFWPTLEQFAEMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFKSLAK
1SL2 Chain:B ((4-100))
--IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK--------
General information:
TITO was launched using:
RESULT:
Template:
1SL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74203 for 680 contacts (-109.1/contact) +
2D Compatibility (PS) -10349 + (NN) -1078 + (LL) 976
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -94654.0 ( -139.20 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1SL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SL2-query.scw
PDB file :
Tito_Scwrl_1SL2.pdb
: