Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIE-FDEAFNENLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKSTGLLDLRILEILHSK
2WFA Chain:A ((2-189))
----FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKIL--DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105057 for 1489 contacts (-70.6/contact) +
2D Compatibility (PS) -20403 + (NN) -11890 + (LL) 2552
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -156648.0 ( -105.20 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_2WFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WFA-query.scw
PDB file :
Tito_Scwrl_2WFA.pdb
: