Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQIDLNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVDNISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAKFLRN-WAKNLELPEGKRTFFNFLASHDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQNP-DGSKS---PYEINVTYMD--------ALSKQADTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRND---YLGVEATSHNRSINRKKYDLAEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLESTAELFVVKRSSDAESIILIHNLSEKE---VSYSLDSGVYT--NLYKGSTVTGSDSIKLSGYEFCWLKTKNYREEQK |
| 1S46 Chain:A ((239-626)) | ------------------------QLEDGRW--VWTTFNSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSQAIV-HPDQVVQY-IGQDECQIGYNPLQMALLWNTLATREVNLLHQALTYRHNLPE-HTAWVNYVRSHDDIGWT----FADEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEA-LYAQRNDPSTAAGQIYQGLRHMIAVRQSNPRFDGGRLVTFNTNNKHIIGYIRNN---ALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164281 for 2732 contacts (-60.1/contact) +
2D Compatibility (PS) -38998 + (NN) -10289 + (LL) 1532
1D Compatibility (HY) -22000 + (ID) 4650
Total energy: -238686.0 ( -87.37 by residue)
QMean score : 0.381
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