Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
3OMT Chain:A ((51-71))
-ETLFDIAEALNVDVRELIVSTK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6444 for 84 contacts (-76.7/contact) +
2D Compatibility (PS) -2221 + (NN) -137 + (LL) 4760
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -7092.0 ( -84.43 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3OMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMT-query.scw
PDB file :
Tito_Scwrl_3OMT.pdb
: