Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVTERVSIIHTEEKINSDDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAGNTGALLAAGLFVVGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEET-KG----DSLHKEAY-----ELLAAE-PSINFIGNIEAR-----DLM---SSVADVVVTDGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
1G8L Chain:A ((149-254)) | ----------------------------------------------------------------------------------------------------------------------------------------VFPAGTRL--TTAELPVIASLGIAEVP-VI--RKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13658 for 473 contacts (-28.9/contact) +
2D Compatibility (PS) -9129 + (NN) -1545 + (LL) 8876
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -19406.0 ( -41.03 by residue)
QMean score : 0.270
|
|
|