Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MKLVKNLEIVESIFGDWDETIIWSCVQGIMGE--------------VFVDSLDQPKSSLAKLG----RKSSFGFLAGQPTLFL--LEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNG--FELRAI---DEKVY---------NSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNG--IEIEVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDAHT----RTSLNLSEKLGYEFSHE---YIAYEID----------------------------- |
| 4AVA Chain:A ((2-333)) | DGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVH--IPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSPALMHYLSEVDY--VDHFVWVVTDGSDPVADARFVRDETDPTVAEIAFTVADAYQGRGIGSFLIGALSVAARVDGV-ERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75202 for 1765 contacts (-42.6/contact) +
2D Compatibility (PS) -25788 + (NN) -217 + (LL) 288
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -110969.0 ( -62.87 by residue)
QMean score : 0.308
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