Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ |
2LIF Chain:A ((1-195)) | ------------------KKGFP--FSIFLLALLSCIT----VPVSAAQVK------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7188 for 94 contacts (-76.5/contact) +
2D Compatibility (PS) -2910 + (NN) -2259 + (LL) 21224
1D Compatibility (HY) -4000 + (ID) 550
Total energy: 4317.0 ( 45.93 by residue)
QMean score : -0.136
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