Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTIND--DGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
| 3RDO Chain:A ((26-54)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEAGITGTWYNQLGSTLIVTAGADGALTGTYESAVGNAEGSYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSASTWSGQYVGGAEARINTQVLTTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6654 for 114 contacts (58.4/contact) +
2D Compatibility (PS) -3046 + (NN) -2432 + (LL) 12204
1D Compatibility (HY) -800 + (ID) 400
Total energy: 12180.0 ( 106.84 by residue)
QMean score : 0.381
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