Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAA---------FNKL------------LPEV--QL--DAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDN----------------YKTDLSQFIKSLPKG-HRLIIVTPYNAKN------MSQVTTVRDYELSLMKKYNYITVADWYKVATEH-----PEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 3RJT Chain:A ((7-214)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGSKLVMVGDSITDCGRAHPVGEAPRGGLGNGYVALVDAHLQVLHPDWRIRVVNVGTSGNTVADVARRWEDDVM-ALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAAS-EHVPFVDVQAEFDRLLAHLNTWV-LAPDRVHPYL-N--GHLVIARAFLTAVGVL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64893 for 1199 contacts (-54.1/contact) +
2D Compatibility (PS) -16153 + (NN) -2498 + (LL) 35816
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -56028.0 ( -46.73 by residue)
QMean score : 0.511
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