Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNESDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4OXD Chain:E ((22-180)) | -------------------------------------------------------------------IIVAN---KHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDH---YSGFRSYETQTKLYQD-------------------AADRYSARPGYSEHQTGLAFDVIGTDG-----EKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAESGLSLEEYYGFEGGDYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30616 for 1058 contacts (-28.9/contact) +
2D Compatibility (PS) -15169 + (NN) -2557 + (LL) 6568
1D Compatibility (HY) -6800 + (ID) 3100
Total energy: -51674.0 ( -48.84 by residue)
QMean score : 0.489
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