Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN |
| 4YDH Chain:A ((358-397)) | ---------------------DVGALLEDTETKNAVLEHMEELQE--QVALLTERLRDAENES------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7175 for 153 contacts (46.9/contact) +
2D Compatibility (PS) -4703 + (NN) -2589 + (LL) 12292
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 9825.0 ( 64.22 by residue)
QMean score : 0.543
|
|
|