Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCLDTEEVQLIITDIMMPMMDGYQLIQELRSAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRRANIVAQHQLIIGNTCLNEDELSLKYFEQEIVFPQKEFRVLFHLLSYPNRIFTRLELLDSIWGMDTDLDERVVDACINKIRRKVEHLPDFKIETVRGVGYRAKND
2A9Q Chain:A ((2-118))
-KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDL-----DGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRR--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91015 for 852 contacts (-106.8/contact) +
2D Compatibility (PS) -12421 + (NN) -7507 + (LL) 9256
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -112937.0 ( -132.56 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2A9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9Q-query.scw
PDB file :
Tito_Scwrl_2A9Q.pdb
: