Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
2X4K Chain:A ((11-50))
----------------------------------------------------------------------------LEGRS-DEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYG
General information:
TITO was launched using:
RESULT:
Template:
2X4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7725 for 182 contacts (-42.4/contact) +
2D Compatibility (PS) -4387 + (NN) -1039 + (LL) 6028
1D Compatibility (HY) 0 + (ID) 450
Total energy: -7573.0 ( -41.61 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2X4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X4K-query.scw
PDB file :
Tito_Scwrl_2X4K.pdb
: