Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MIPFTIEYIFVLIGAFLLSIILTPIIRVISLKVGAVDKPNARR-INKVPMPSSGG--LAIFLSFVVTTLFFMPMAASRHFIEVSYFHYILPVIIGGLVVTTTGFIDDI---FELRPRYKMLGIIIAAVIIWKFTHFRFDSFKIPIGGPLLEFGPILTFFLTVLWIISITNAINL--IDGLDGLVSGVSIISLATMAVVSYFFLPKIDFFLTLTIVILIASIVGFFPYNYHPAIIYLGDAGALFIGFMIGVLSLQGLKNSTAVAVITPVIILGVPILDTAVAIVRRKLS----GKKISEADKMHLHHRLLSMGFTHRGAVLVVYGIAIIFSLIALLLNVSSRI-------GGIFLLLALLLAMEIFIEGLNIWGENRTPLFNLLK---FIGNSDYRQSVIAKYSDKHQK--------- |
| 4L6Y Chain:A ((6-454)) | RRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEESLKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQELKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCMEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLRTQIRELWDRLQIP---------EEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFYSQEQRQAFAPFCAEYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180972 for 2093 contacts (-86.5/contact) +
2D Compatibility (PS) -37977 + (NN) -2716 + (LL) 1056
1D Compatibility (HY) 1600 + (ID) 2400
Total energy: -221409.0 ( -105.79 by residue)
QMean score : 0.072
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