Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSKLDNLYMAVVADHSKHPHHHGFL-EGVEQVQLNNPTCGDVISLSVKFDGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLADVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL
2QQ4 Chain:G ((2-138))
---SVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVV-EGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR-------
General information:
TITO was launched using:
RESULT:
Template:
2QQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69908 for 1127 contacts (-62.0/contact) +
2D Compatibility (PS) -14345 + (NN) -8196 + (LL) 844
1D Compatibility (HY) -10400 + (ID) 3150
Total energy: -105155.0 ( -93.31 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2QQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQ4-query.scw
PDB file :
Tito_Scwrl_2QQ4.pdb
: