Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHILWEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISN-NNIHAGVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLDMTKTHFYNPSGAVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYEETFTTYNYSTPGAKFGL-----EGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQDGEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVKPKKEVTKTKTKSIQEQPQTKEQWWTKTDQFIQSHFVSILIVLGTIAILCLLAGIVLLIKRSR
1NJ4 Chain:A ((21-241))-------------------------------------------------ILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN---------KGSSLMFLKPGMQVPVSQLIRDINLQSGNDACVAMAD-FAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDA---DGQYS------------SARDMALIGQALIRDVPN-----EY--------SIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRP


General information:
TITO was launched using:
RESULT:

Template: 1NJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -97453 for 1687 contacts (-57.8/contact) +
2D Compatibility (PS) -22022 + (NN) -8611 + (LL) 6368
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -137968.0 ( -81.78 by residue)
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_1NJ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NJ4-query.scw
PDB file : Tito_Scwrl_1NJ4.pdb: