Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLDMLSYDFMQRALLAVVAISIFAPILGIFL-----------ILRRQSLMSDTLSHVSLA-GVALGVVLGISPTWSTIFVVTLAAVVLEYLRTVYKHYMEISTAILMS---------------MGLAISLIVMSKAHNVGNVSLEQYLFGSIITIGKEQVIALFVIALITFILTILFIRPMYILTFDEDTAFVDGLPVRTMSILFNVVTGIAIALTIPAAGALLVSTIMVLPASIAMRLGRNFKTVIFLGMLIGFVGMVAGIFLSYYWETPASATITMIFIGIFLLVSLVGLLRKR |
| 4FPR Chain:A ((1-130)) | ------------------AYVCREASISGEIRYPQGTCPTKTEALNDCNKVTKGLIDFSQSHQRAWGIDMTAKVQCAPCKTTDPWDVVLCTCKITAHRYREFVPKIPYSSFSSAPGVIFRQETGLDHDPEWVVNMKARTRGCDHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76474 for 628 contacts (-121.8/contact) +
2D Compatibility (PS) -10818 + (NN) 3825 + (LL) 17160
1D Compatibility (HY) 1600 + (ID) 950
Total energy: -65657.0 ( -104.55 by residue)
QMean score : -0.100
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