Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNSLQKLRKSRKLSQAELAVALGVTRQTIISLEKEKYTASLELAFKIARYFDKQIEEVFIYTESERG
1Y7Y Chain:A ((18-73))
----LRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF--------
General information:
TITO was launched using:
RESULT:
Template:
1Y7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34577 for 381 contacts (-90.8/contact) +
2D Compatibility (PS) -6067 + (NN) -3075 + (LL) 620
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -47199.0 ( -123.88 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7Y-query.scw
PDB file :
Tito_Scwrl_1Y7Y.pdb
: