Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFIGLAKQG----------------YYDGIIFHRIIPDFMIQGGDPTGTGMGGESIYGESFEDEFSEEL-YNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVETGSQDKPLEDVVILTIEVKE |
1W74 Chain:A ((16-182)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATLHTNRGDIKIALFGNHAPKTVANFVGLA-QGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGY---KFADEFHPELQFDKPYLLAMANAGPGTNGSQFFIT---------------------------VGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77985 for 1176 contacts (-66.3/contact) +
2D Compatibility (PS) -15941 + (NN) -5163 + (LL) 19840
1D Compatibility (HY) -12400 + (ID) 4150
Total energy: -95799.0 ( -81.46 by residue)
QMean score : 0.573
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