Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGILD--GIISEEEVNYYLNTISRQTNRLNHLVEEL-SFITLETMSDTAEPHKEETIYLDKLLIDILSEF------QLVFEKENRQVMIDVAPDVSKLSSQYDKLSRILLNLISNAVKYSDPGSPLT-IKAYSNRQD--IVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK |
4JAU Chain:A ((7-241)) | ------------------------------------------------------------------------------------------------------SKELER----LKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFES-NVPCPVEAYIDPTRIR-------QVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDS---------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73267 for 1404 contacts (-52.2/contact) +
2D Compatibility (PS) -22769 + (NN) -5895 + (LL) 10280
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -112751.0 ( -80.31 by residue)
QMean score : 0.477
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