Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKQKIAVLGPGSWGTALAQVLNDN--GHE------VRLWGNVVEQ-------IEEINTSHTNQRYFKDITLDSKIKAYTNLEEAINNVDSILFVVPTKVTRLVAKQVANLLKHKVVIMHASKGLEPGTH--ERLSTILEEEISEQYRSDIVVVSGPSHAEEAIVRDITLITAA---SKDIGAA------KYVQKLFSNHYFRLYTNTDVVGVETAGALKNIIAVGAGALHGLGYGDNAKAAIITRGLAEITRLGVQL---GADPLTFSGLSGVGDLIVTGTSVHSRNWRAGDALG-RGEKLEDIEKNM--GMVIEGISTTKVAYEIAQNLNVY--MPITEAIYKSIYEGANIKDSILDMMSNEFRSENEWH |
| 4FGW Chain:A ((36-383)) | ----KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMW--VFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGA----LSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVYNNYPMKN-LPDMIEE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189797 for 2726 contacts (-69.6/contact) +
2D Compatibility (PS) -33074 + (NN) -3504 + (LL) 1240
1D Compatibility (HY) -22800 + (ID) 5300
Total energy: -253235.0 ( -92.90 by residue)
QMean score : 0.524
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