Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIIKNLWWFFKEEKKRYLIGILSLSLVAVLNLIPPKIMGSVIDAITTGKLTRPQLLWNLLGLVLSALAMYGLRY-IWRMYILGTS-YKLGQVVRYRLFEHFTKMSPSFYQKYRTGDLMAHATNDINSLTRLAGGGVMSAVDASITALVTLITMFFTISWQMTLIAVIPLPLMALATSKLGRKTHETFKESQAAFSELNNKVQESVSGVKVTKSFGYQEQEIASF-QEINQMTFVKNMRTMTYDVMFDPLVLLFIGASYVLT-LAMGAFMISKGQVTVGDLVTFVTYLDMLVWPLMAIGFL---FNMVQRGSVSYNRINSLLEQESDITDPLNP----IKPVVNGTLRYDIDFFRYDNEETLA---DIHFTLEKGQTLGLVGQTGSGKTSLIKLLLREHDVTQGKITLNKHDIRDYRLSELRQLIGYVPQDQFLFATSILENVRFGNPTLSINAVKEATKLAHVYDD---IEQMPAGFETLIGEKGVSLSGGQKQRIAMSRAMILDPDILILDDSLSAVDAKTEHAIVENLKTNRQGKSTIISAHRLSAVVHADLILVMRDGRVIERGQHQELLNKGGWYAETYASQQLEMEEAFDEV |
| 3ZDQ Chain:A ((17-571)) | -------------ERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFF-VSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGL--SGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYA---FWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKL--PFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKP--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235485 for 3816 contacts (-61.7/contact) +
2D Compatibility (PS) -56606 + (NN) -21571 + (LL) 3788
1D Compatibility (HY) -31600 + (ID) 8350
Total energy: -349824.0 ( -91.67 by residue)
QMean score : 0.327
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