Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTYEKIYQILSKNNNFISGETMANQLNISRTAIWKGIKTLEELGLEIESVTNKGYRLVSGDILLPEQ--LEQEIGIKVSLNN--NSASTQLDAKMGIESKLKTPHLFLAPNQKKAKGRFDRPFFTSNQGGIYMSLLLQPNVPIEDIKPYTVMVASSAVKAISRLTGITPEIKWVNDIYLDNKKIAGILTEAIASVESGLVTNVIIGLGINFYIKEFPRALTKRAGSLFTEQP-TITRN----QLITEI---WNLFFNIPLEDHLKVYREKSLVLDKTVSFMDGQTMYSGKAIDITDKGYLVVELDDGQLKTLRSGEISLSSW |
| 1BIA Chain:A ((13-317)) | ----------LLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIG---ELKSGDACIAEYQQAG---------SPFGANLYLSMFWRLEQ-PAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTG------AAQIVIGAGINMAM-----------WITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLE-QDGIIKPWMGGEISLR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105940 for 2017 contacts (-52.5/contact) +
2D Compatibility (PS) -28788 + (NN) -11240 + (LL) 3104
1D Compatibility (HY) -20000 + (ID) 3950
Total energy: -166814.0 ( -82.70 by residue)
QMean score : 0.521
|
|
|