Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQFLKSAAILSLAVTAVSTSQPVAGITKDYNNRNEKVKKYLQENNFGHKIAYGWKNKVEFDFRYLLDTAKYLVNKEEFQDPLYNDAREELISFIFPYEKFLINNRDITKLTVNQYEAIVNRMSVALQKFSKNIFEKQKVNKDLIPIAFWIEKSYRTVGTNEIAASVGIQGGFYQNFHDYYNYSYLLNSLWHEGNVKEVVKDYENTIRQILSKKHEIEKILNQSTSDISIDDDDYEKGNKELLREKLNIILNLSKRDYRVTPYYEVNKLHTGLILLEDVPNLKIAKDKLFSLENSLKEYK--GEKVNYEELRFNTEPLTSYLENKEKFLV-PNIPYKNKLILREEDKYSFEDDEEEFGNELLSYN---KLKNEVLPVNITTSTILKPFEQKKIVEDFNPYSNLDNLEIKKIRLNGSQKQKVEQEKTKSPTPQKETVKEQTEQKVSGNTQEVEKKSETVATSQQSSVAQTSVQQPAPVQSVVQESKASQEEINAAHDAISAYKSTVNIANTAGVTTAEMTTLINTQTSNLSDVEKALGNNKVNNGAVNVLREDTARLENMIWNRAYQAIEEFNVARNTYNNQIKTETVPVDNDIEAILAGSQAKISHLDNRIGARHMDQAFVASLLEVTEMSKSISSRIKE |
| 2O0A Chain:A ((65-173)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPHLKVSEDKFFTQEYSVYHDMCLNQKKNFNLISLSTTPHGSLRESLIKFLAEKDTIYQKQYVITLQ--FVFLSDDEFSQDMLLDY-DSIKLKFEKHSISLDSKLVIIENGLEDLPLNFSCDSGMGIIKVQFFPRDSPVPVDFYFIELNNLKSIEQFDKSIFKKSCETPIALVLKKLISDTKSFFLLNLNDSKNVNKLLTISEEVQTQLC-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8922 for 483 contacts (18.5/contact) +
2D Compatibility (PS) -9682 + (NN) -628 + (LL) 30368
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: 21230.0 ( 43.95 by residue)
QMean score : 0.279
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