Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYRGHVYG-DWDDGERFAY-FQLAALELMEKI---NFIPDVLHVHDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQ----FGPEMLGDLFGVGAERYEDGTLRWNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEFGKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSNLEG-KIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQ----QDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFSGYWLMQTLKLALEV-YNDYPEAWKKLQWQAMSKDFSWDTACVAYEQLYQQLQ |
| 3L01 Chain:A ((3-427)) | MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQ---GEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSE------DVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK-------YFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-----APYPD--------IDPEHTGGYIADIVTTVSRGYLID----EWG-----FFRNFEGKITYVFNGIDCSFWN------------ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-------NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS--FSWEKSAERYVKAYA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268384 for 3596 contacts (-74.6/contact) +
2D Compatibility (PS) -44621 + (NN) -17992 + (LL) 3556
1D Compatibility (HY) -28800 + (ID) 6100
Total energy: -362341.0 ( -100.76 by residue)
QMean score : 0.477
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