Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKTQALIEQYSKSLVEVAIEHKIVEKIQQEVAALIDIFETSELEGVLSSLAVSHDEKQHFVKTLQTSCSTYLVNFLEVIVQNEREALLYPILKSV--DQELI----KVNGQYPIQITTAVALSPEQKERLFDIAKTKLALPNGQLVEHIDPS---IVGGFVVNANNKVIDASVRNQLHQFKMKLK |
| 3J25 Chain:A ((313-407)) | -------------------------------------------------------------------------------VILQNE-----FLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLD-ALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3045 for 436 contacts (-7.0/contact) +
2D Compatibility (PS) -8988 + (NN) -1042 + (LL) 8704
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -11821.0 ( -27.11 by residue)
QMean score : 0.299
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