Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSING---KKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQ-VGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
1W66 Chain:A ((7-218)) | ---IRSKLSAIDVRQLG---TVDYRTAWQLQRELADARVAG-GADTLLLLEHPAVYTAGRRTET--H-E-----RPIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAE--PLDVVNYVRRLEESLIQVCADLGLHAG-------RVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIV-----PCGI--------S---DAAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLP------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162388 for 1704 contacts (-95.3/contact) +
2D Compatibility (PS) -21941 + (NN) -4319 + (LL) 4780
1D Compatibility (HY) 3200 + (ID) 1400
Total energy: -182068.0 ( -106.85 by residue)
QMean score : 0.370
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