Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTETKGDAIDVMQSSESISGTTNSITDSH----TSIKHGVTLLSQNISQAKKAKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
1E29 Chain:A ((35-135)) | --------------------------------------------------------------------------------DTCTQCHLQGKTKTNNNVSLGLADLAGAEPRRDNVLALVEFLKNPKSY------DGEDDYSELHPNISRPDIYPEMRNYTEDDIFDVAGYTLIAPKLDERWGGTIYF----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4282 for 621 contacts (6.9/contact) +
2D Compatibility (PS) -9783 + (NN) 1021 + (LL) 9988
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -1392.0 ( -2.24 by residue)
QMean score : 0.278
|
|
|