Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMDWETFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR |
3D7A Chain:A ((7-33)) | ------------------------------------------------------------------------EVEVEAYVYPTEDIRKVKKAMLNLIPGLQFEAFDKGEYVILVGRTKDKRALQRLYELFRGQQILDTARMMLEEGYFGEEIIIKVHKQVAYVGKVNFNEDSPLGPITITIRTKEPQKLMKWLAPRTKDGVPIE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8975 for 110 contacts (-81.6/contact) +
2D Compatibility (PS) -2935 + (NN) -2983 + (LL) 6996
1D Compatibility (HY) 400 + (ID) 150
Total energy: -7647.0 ( -69.52 by residue)
QMean score : 0.359
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