Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
3MMV Chain:A ((186-239)) | ----------------------------------------------------------------------------------------------------------------DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVA-LDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3882 for 265 contacts (-14.6/contact) +
2D Compatibility (PS) -5674 + (NN) -51 + (LL) 9256
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -4201.0 ( -15.85 by residue)
QMean score : 0.358
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